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• Save() : SimShell::Gui::HasUnsavedChanges
• SaveAndClose() : SimShell::Gui::HasUnsavedChanges
• SavePath() : SimPT_Shell::Gui::PTreeEditor
• ScaleView() : SimShell::Gui::PanAndZoomView
• Scaling() : SimShell::Gui::PanAndZoomView
• Second() : SimPT_Editor::EditableEdgeItem
• SegmentedVector() : SimPT_Sim::Container::SegmentedVector< T, N >
• SelectCells() : SimPT_Editor::EditControlLogic
• Selected() : SimPT_Parex::ExplorationSelection
• SelectedAttributes() : SimPT_Editor::CopyAttributesDialog
• SelectedCells() : SimPT_Editor::EditControlLogic
• SelectEdges() : SimPT_Editor::EditControlLogic
• SelectedIsAtBoundary() : SimPT_Editor::TissueGraphicsView
• SelectedIsDeletable() : SimPT_Editor::TissueGraphicsView
• SelectedIsSplitable() : SimPT_Editor::TissueGraphicsView
• SelectedNodes() : SimPT_Editor::EditControlLogic
• SelectedWalls() : SimPT_Editor::EditControlLogic
• SelectionChanged() : SimPT_Editor::EditControlLogic , SimPT_Shell::ConversionList
• SelectNodes() : SimPT_Editor::EditControlLogic
• SendAck() : SimPT_Parex::ServerClientProtocol , SimPT_Parex::ServerNodeProtocol
• SendExploration() : SimPT_Parex::ClientProtocol
• SendExplorationNames() : SimPT_Parex::ServerClientProtocol
• SendMessage() : SimPT_Parex::Connection
• SendPage() : SimPT_Parex::SendPage
• SendPtree() : SimPT_Parex::Protocol
• SendSimResult() : SimPT_Parex::NodeProtocol
• SendStatus() : SimPT_Parex::ServerClientProtocol
• SendStatusDeleted() : SimPT_Parex::ServerClientProtocol
• SendTask() : SimPT_Parex::ServerNodeProtocol
• Server() : SimPT_Parex::Server
• ServerClientProtocol() : SimPT_Parex::ServerClientProtocol
• ServerDialog() : SimPT_Parex::ServerDialog
• ServerInfo() : SimPT_Parex::ServerInfo
• Session() : SimShell::Ws::IProject , SimShell::Ws::Project< FileType, index_file >
• Set() : SimPT_Sim::AttributeContainer , SimShell::Gui::EnabledActions
• SetActive() : SimShell::Ws::Util::FileSystemWatcher
• SetAll() : SimPT_Sim::AttributeContainer
• SetBackground() : SimPT_Editor::TissueGraphicsView
• SetBoundaryPolygonNodes() : SimPT_Sim::MeshState
• SetBoundaryPolygonWalls() : SimPT_Sim::MeshState
• SetCellID() : SimPT_Sim::MeshState
• SetCellNodes() : SimPT_Sim::MeshState
• SetCellsID() : SimPT_Sim::MeshState
• SetCellWalls() : SimPT_Sim::MeshState
• SetChildren() : SimShell::Gui::HasUnsavedChanges
• SetClean() : SimShell::Gui::PTreeView
• SetColor() : SimPT_Editor::EditableCellItem
• SetColorComponent() : SimPT_Editor::TissueGraphicsView
• setData() : SimShell::Gui::CheckableTreeModel
• SetDisplayModePreferences() : SimPT_Editor::TissueGraphicsView
• SetDockWidgetState() : SimShell::PTreeQtState
• SetHighlightColor() : SimPT_Editor::EditableCellItem , SimPT_Editor::EditableEdgeItem , SimPT_Editor::EditableItem , SimPT_Editor::EditableNodeItem
• SetLengthDirty() : SimPT_Sim::Wall
• SetMaxID() : SimPT_Editor::SelectByIDWidget
• SetMeshState() : SimPT_Sim::SimState
• SetMinNumWorkers() : SimPT_Parex::WorkerPool
• SetMode() : SimPT_Editor::TissueGraphicsView
• setModel() : SimShell::Gui::PTreeView , SimShell::Gui::WorkspaceView
• SetName() : SimPT_Parex::Exploration
• SetNodeID() : SimPT_Sim::MeshState
• SetNodesID() : SimPT_Sim::MeshState
• SetNodesX() : SimPT_Sim::MeshState
• SetNodesY() : SimPT_Sim::MeshState
• SetNodeX() : SimPT_Sim::MeshState
• SetNodeY() : SimPT_Sim::MeshState
• SetNum() : SimPT_Sim::AttributeContainer
• SetNumCells() : SimPT_Sim::MeshState
• SetNumNodes() : SimPT_Sim::MeshState
• SetNumWalls() : SimPT_Sim::MeshState
• SetOnlyEditData() : SimShell::Gui::PTreeContainer , SimShell::Gui::PTreeEditorWindow , SimShell::Gui::PTreeModel
• SetParameters() : SimPT_Editor::EditControlLogic , SimPT_Shell::Session::SimSession , SimPT_Shell::Session::SimSessionCoupled , SimPT_Sim::SimState , SimShell::Session::ISession
• SetProjectName() : SimPT_Sim::SimState
• SetPTreeState() : SimShell::Gui::Controller::AppController , SimShell::Gui::Controller::ProjectController , SimShell::Gui::Controller::WorkspaceController , SimShell::Gui::IHasPTreeState , SimShell::Gui::MyDockWidget , SimShell::Gui::MyTreeView , SimShell::Gui::PTreeContainer , SimShell::Gui::PTreeEditorWindow
• SetRandomEngineState() : SimPT_Sim::SimState
• SetRectangle() : SimPT_Editor::RegularTiling
• SetRunning() : SimShell::Gui::Controller::ProjectController
• SetSelectionText() : SimPT_Shell::StepSelection
• SetStepRanges() : SimPT_Shell::StepFilterProxyModel
• SetSweep() : SimPT_Parex::ParameterExploration
• SetTime() : SimPT_Sim::SimState
• SetTimeStep() : SimPT_Sim::SimState
• SetToolTip() : SimPT_Editor::EditableNodeItem
• SetTransparent() : SimPT_Editor::EditableCellItem
• SetTransparentCells() : SimPT_Editor::TissueGraphicsView
• SetTreeViewState() : SimShell::PTreeQtState
• SetUndoStack() : SimShell::Gui::PTreeModel
• Setup() : SimPT_Parex::WorkerRepresentative
• SetUserData() : SimShell::Ws::Project< FileType, index_file > , SimShell::Ws::Workspace< ProjectType, index_file >
• setValues() : SimPT_Sim::Mesh
• SetVariables() : SimPT_Sim::TransportEquations
• SetWallID() : SimPT_Sim::MeshState
• SetWallsID() : SimPT_Sim::MeshState
• SetWatchingDirectory() : SimShell::Ws::IProject , SimShell::Ws::Project< FileType, index_file >
• SetWidgetState() : SimShell::PTreeQtState
• Show() : SimPT_Editor::EditorActions
• showEvent() : SimPT_Parex::TaskOverview
• Sim() : SimPT_Sim::Sim
• SimEvent() : SimPT_Sim::Event::SimEvent
• SimplyRed() : SimPT_Default::CellColor::SimplyRed
• SimResult() : SimPT_Parex::SimResult
• SimSession() : SimPT_Shell::Session::SimSession
• SimSessionCoupled() : SimPT_Shell::Session::SimSessionCoupled
• SimTask() : SimPT_Parex::SimTask
• Simulator() : SimPT_Parex::Simulator
• Size() : SimPT_Default::CellColor::Size
• size() : SimPT_Sim::Container::SegmentedVector< T, N >
• sizeHint() : SimShell::Gui::PTreeEditorWindow
• SliceItem() : SimPT_Editor::SliceItem
• SlicePolygon() : SimPT_Editor::PolygonUtils
• SmithPhyllotaxis() : SimPT_Default::CellChemistry::SmithPhyllotaxis , SimPT_Default::CellDaughters::SmithPhyllotaxis , SimPT_Default::CellHousekeep::SmithPhyllotaxis , SimPT_Default::CellToCellTransport::SmithPhyllotaxis
• SolveTask() : SimPT_Parex::Simulator
• Source() : SimPT_Default::CellChemistry::Source , SimPT_Default::CellToCellTransport::Source
• SplitCell() : SimPT_Editor::EditableMesh , SimPT_Editor::EditControlLogic , SimPT_Editor::TissueGraphicsView
• SplitEdge() : SimPT_Editor::EditableEdgeItem , SimPT_Editor::EditableMesh , SimPT_Editor::EditControlLogic , SimPT_Editor::TissueGraphicsView
• StandardNormal() : SimPT_Default::MoveGenerator::StandardNormal
• StandardUniform() : SimPT_Default::MoveGenerator::StandardUniform
• Start() : SimPT_Parex::NodeAdvertiser , SimPT_Sim::ClockMan::Stopwatch< T >
• StartCut() : SimPT_Editor::TissueSlicer
• StartPage() : SimPT_Parex::StartPage
• StartSimulation() : SimPT_Shell::Session::SimSession , SimPT_Shell::Session::SimSessionCoupled , SimShell::Session::ISession
• StartTask() : SimPT_Parex::TaskOverview
• StartupFileBase() : SimPT_Shell::Ws::StartupFileBase
• StartupFileHdf5() : SimPT_Shell::Ws::StartupFileHdf5
• StartupFilePtree() : SimPT_Shell::Ws::StartupFilePtree
• StartupFileXml() : SimPT_Shell::Ws::StartupFileXml
• StartupFileXmlGz() : SimPT_Shell::Ws::StartupFileXmlGz
• Status() : SimPT_Parex::Status
• StatusChanged() : SimShell::Gui::PTreeEditorWindow , SimShell::Gui::PTreeView
• StatusInfoChanged() : SimPT_Editor::EditControlLogic , SimPT_Editor::TissueGraphicsView
• StepFilterProxyModel() : SimPT_Shell::StepFilterProxyModel
• StepSelection() : SimPT_Shell::StepSelection
• Stop() : SimPT_Parex::NodeAdvertiser , SimPT_Sim::ClockMan::Stopwatch< T >
• StopMoveNode() : SimPT_Editor::EditControlLogic
• StoppedMoving() : SimPT_Editor::EditControlLogic
• StopSimulation() : SimPT_Shell::Session::SimSession , SimPT_Shell::Session::SimSessionCoupled , SimShell::Session::ISession
• StopTask() : SimPT_Parex::ClientProtocol , SimPT_Parex::ExplorationManager , SimPT_Parex::NodeProtocol , SimPT_Parex::ServerClientProtocol , SimPT_Parex::ServerNodeProtocol , SimPT_Parex::Simulator , SimPT_Parex::TaskOverview , SimPT_Parex::WorkerRepresentative
• Stopwatch() : SimPT_Sim::ClockMan::Stopwatch< T >
• Store() : SimShell::Gui::PTreeModel
• Subscribe() : SimPT_Parex::ServerClientProtocol
• SubscribeUpdates() : SimPT_Parex::ClientProtocol
• SuccessfullySent() : SimPT_Parex::NodeProtocol
• SVIterator() : SimPT_Sim::Container::SVIterator< T, N, P, R, is_const_iterator >
• SweepOverNodes() : SimPT_Sim::NodeMover