VPTissue Reference Manual
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Equations for reaction and transport processes. More...
#include <TransportEquations.h>
Public Member Functions | |
TransportEquations (const CoreData &cd) | |
Initializing constructor. | |
void | GetDerivatives (std::vector< double > &derivs) const |
Interact with the mesh to calculate values of derivatives,. | |
int | GetEquationCount () const |
Two equations per chemical for each walls, and one equation per chemical for each cell. More... | |
void | GetVariables (std::vector< double > &values) const |
Interact with the mesh to get values of transport variables. | |
void | Initialize (const CoreData &cd) |
Straight initialization or re-initialization. | |
void | SetVariables (std::vector< double > const &values) const |
Interact with mesh to set values for transport variables. | |
Equations for reaction and transport processes.
Two equations per chemical for each wall, and one equation per chemical for each cell. This is for generality. For a specific model you may optimize this by removing superfluous (empty) equations. Layout of derivatives is as follows: cells[chem1...chem n] walls[[w1(chem 1)...w1(chem n)][w2(chem 1)...w2(chem n)]]
Definition at line 39 of file TransportEquations.h.
int SimPT_Sim::TransportEquations::GetEquationCount | ( | ) | const |
Two equations per chemical for each walls, and one equation per chemical for each cell.
This is for generality. For a specific model you may optimize this by removing superfluous (empty) equations.
Definition at line 83 of file TransportEquations.cpp.
Referenced by SimPT_Default::TimeEvolver::Transport::operator()().