VPTissue Reference Manual

Equations for reaction and transport processes. More...
#include <TransportEquations.h>
Public Member Functions  
TransportEquations (const CoreData &cd)  
Initializing constructor.  
void  GetDerivatives (std::vector< double > &derivs) const 
Interact with the mesh to calculate values of derivatives,.  
int  GetEquationCount () const 
Two equations per chemical for each walls, and one equation per chemical for each cell. More...  
void  GetVariables (std::vector< double > &values) const 
Interact with the mesh to get values of transport variables.  
void  Initialize (const CoreData &cd) 
Straight initialization or reinitialization.  
void  SetVariables (std::vector< double > const &values) const 
Interact with mesh to set values for transport variables.  
Equations for reaction and transport processes.
Two equations per chemical for each wall, and one equation per chemical for each cell. This is for generality. For a specific model you may optimize this by removing superfluous (empty) equations. Layout of derivatives is as follows: cells[chem1...chem n] walls[[w1(chem 1)...w1(chem n)][w2(chem 1)...w2(chem n)]]
Definition at line 39 of file TransportEquations.h.
int SimPT_Sim::TransportEquations::GetEquationCount  (  )  const 
Two equations per chemical for each walls, and one equation per chemical for each cell.
This is for generality. For a specific model you may optimize this by removing superfluous (empty) equations.
Definition at line 83 of file TransportEquations.cpp.
Referenced by SimPT_Default::TimeEvolver::Transport::operator()().