Contains the state of the whole Mesh at a given simulation step. More...

#include <MeshState.h>

Collaboration diagram for SimPT_Sim::MeshState:

Public Member Functions
	MeshState ()
	Creates a meshstate that represents an empty mesh with no nodes / cells / walls.

void	PrintToStream (std::ostream &out) const
	Prints a textual representation of this MeshState to output stream. More...

Nodes
Methods for handling nodes in the mesh. Note that the collective node operations assume the passed/retrieved containers to be ordered by node index and NOT by node ID!
size_t	GetNumNodes () const
	Returns the number of nodes in the mesh.

void	SetNumNodes (size_t n)
	Sets the number of nodes in the mesh. More...

int	GetNodeID (size_t node_idx) const
	Returns the ID of a particular node.

double	GetNodeX (size_t node_idx) const
	Returns the x coordinate of a particular node.

double	GetNodeY (size_t node_idx) const
	Returns the y coordinate of a particular node.

std::vector< int >	GetNodesID () const
	Returns the IDs of all nodes.

std::vector< double >	GetNodesX () const
	Returns the x coordinates of all nodes.

std::vector< double >	GetNodesY () const
	Returns the y coordinates of all nodes.

AttributeContainer &	NodeAttributeContainer ()
	Adds a new named attribute of type T for the nodes.

const AttributeContainer &	NodeAttributeContainer () const
	Adds a new named attribute of type T for the nodes.

void	SetNodeID (size_t node_idx, int value)
	Sets the ID of a particular node.

void	SetNodeX (size_t node_idx, double value)
	Sets the x coordinate of a particular node.

void	SetNodeY (size_t node_idx, double value)
	Sets the y coordinate of a particular node.

void	SetNodesID (std::vector< int > values)
	Sets the IDs of all nodes.

void	SetNodesX (std::vector< double > values)
	Sets the x coordinates of all nodes.

void	SetNodesY (std::vector< double > values)
	Sets the y coordinates of all nodes.

Cells
Methods for handling cells in the mesh. Note that the collective cell operations assume the passed/retrieved containers to be ordered by cell index and NOT by cell ID!
size_t	GetNumCells () const
	Returns the number of cells in the mesh.

void	SetNumCells (size_t n)
	Sets the number of cells in the mesh. More...

AttributeContainer &	CellAttributeContainer ()
	Adds a new named attribute of type T for the nodes.

const AttributeContainer &	CellAttributeContainer () const
	Adds a new named attribute of type T for the nodes.

int	GetCellID (size_t cell_idx) const
	Returns the ID of a particular cell.

size_t	GetCellNumNodes (size_t cell_idx) const
	Returns the number of nodes that define the polygon of a particular cell.

std::vector< int >	GetCellNodes (size_t cell_idx) const
	Returns the IDs of the nodes that form the polygon of a particular cell.

size_t	GetCellNumWalls (size_t cell_idx) const
	Returns the number of walls of a particular cell.

std::vector< int >	GetCellWalls (size_t cell_idx) const
	Returns the IDs of walls of a particular cell.

void	SetCellID (size_t cell_idx, int value)
	Sets the ID of a particular cell.

void	SetCellNodes (size_t cell_idx, std::vector< int > node_ids)
	Sets the IDs of the nodes that form the polygon of a particular cell.

void	SetCellWalls (size_t cell_idx, std::vector< int > wall_ids)
	Sets the IDs of walls of a particular cell.

std::vector< int >	GetCellsID () const
	Returns the IDs of all cells.

std::vector< size_t >	GetCellsNumNodes () const
	Returns the number of nodes for all cells.

std::vector< size_t >	GetCellsNumWalls () const
	Returns the number of walls for all cells.

void	SetCellsID (std::vector< int > values)
	Sets the IDs of all cells.

std::vector< int >	GetBoundaryPolygonNodes () const
	Returns the IDs of the nodes that form the boundary polygon of the tissue.

std::vector< int >	GetBoundaryPolygonWalls () const
	Returns the IDs of the walls that form the boundary polygon of the tissue.

void	SetBoundaryPolygonNodes (std::vector< int > node_ids)
	Sets the IDs of the nodes that form the boundary polygon of the tissue.

void	SetBoundaryPolygonWalls (std::vector< int > wall_ids)
	Sets the IDs of the walls that form the boundary polygon of the tissue.

Walls
Methods for handling walls in the mesh.
size_t	GetNumWalls () const
	Returns the number of walls in the mesh.

void	SetNumWalls (size_t n)
	Sets the number of walls in the mesh. More...

AttributeContainer &	WallAttributeContainer ()
	Adds a new named attribute of type T for the nodes.

const AttributeContainer &	WallAttributeContainer () const
	Adds a new named attribute of type T for the nodes.

int	GetWallID (size_t wall_idx) const
	Returns the ID of a particular wall.

std::pair< int, int >	GetWallNodes (size_t wall_idx) const

std::pair< int, int >	GetWallCells (size_t wall_idx) const

void	SetWallID (size_t wall_idx, int value)
	Sets the ID of a particular wall.

void	SetWallNodes (size_t wall_idx, std::pair< int, int > nodes_ids)

void	SetWallCells (size_t wall_idx, std::pair< int, int > cells_ids)

std::vector< int >	GetWallsID () const
	Returns the IDs of all walls.

void	SetWallsID (std::vector< int > values)
	Sets the IDs of all walls.

Detailed Description

Contains the state of the whole Mesh at a given simulation step.

This class is mainly supposed to be a data object to pass around mesh state information for saving and loading.

Definition at line 41 of file MeshState.h.

Member Function Documentation

void SimPT_Sim::MeshState::PrintToStream ( std::ostream & out ) const

Prints a textual representation of this MeshState to output stream.

Parameters

[in,out] out The ouput stream to use for printing.

Note: This method is mainly used for debug purposes.

Definition at line 303 of file MeshState.cpp.

Referenced by SimPT_Sim::SimState::PrintToStream().

Here is the caller graph for this function:

void SimPT_Sim::MeshState::SetNumCells ( size_t n )

Sets the number of cells in the mesh.

This method must be called with the requested number of cells prior to setting any cell properties since it preallocates space for all cell related props.

Definition at line 136 of file MeshState.cpp.

Referenced by SimPT_Sim::Mesh::GetState().

Here is the caller graph for this function:

void SimPT_Sim::MeshState::SetNumNodes ( size_t n )

Sets the number of nodes in the mesh.

This method must be called with the requested number of nodes prior to setting any node properties since it preallocates space for all node related props.

Definition at line 45 of file MeshState.cpp.

Referenced by SimPT_Sim::Mesh::GetState().

Here is the caller graph for this function:

void SimPT_Sim::MeshState::SetNumWalls ( size_t n )

Sets the number of walls in the mesh.

This method must be called with the requested number of walls prior to setting any wall properties since it preallocates space for all wall related props.

Definition at line 249 of file MeshState.cpp.

Referenced by SimPT_Sim::Mesh::GetState().

Here is the caller graph for this function:

The documentation for this class was generated from the following files:

Public Member Functions

Detailed Description

Member Function Documentation