#include <CellAttributes.h>

Inheritance diagram for SimPT_Sim::CellAttributes:

Collaboration diagram for SimPT_Sim::CellAttributes:

Public Member Functions
	CellAttributes (unsigned int chem_count)

BoundaryType	GetBoundaryType () const

int	GetCellType () const

double	GetChemical (unsigned int c) const

std::vector< double >	GetChemicals () const

int	GetDivisionCounter ()

int	GetDivisionTime ()

double	GetSolute () const

double	GetStiffness () const

double	GetTargetArea () const

double	GetTargetLength () const

void	IncrementDivisionCounter ()

bool	IsDead () const

bool	IsFixed () const

virtual std::ostream &	Print (std::ostream &os) const

virtual void	ReadPtree (const boost::property_tree::ptree &cell_pt)

BoundaryType	SetBoundaryType (BoundaryType b)

void	SetCellType (int ct)

void	SetChemical (unsigned int chem, double conc)

void	SetChemicals (std::vector< double > const &chem)

void	SetDead (bool dead)

void	SetDivisionCounter (int div_counter)

void	SetDivisionTime (double div_time)

void	SetSolute (double s)

void	SetStiffness (double stiffness)

void	SetTargetArea (double a)

void	SetTargetLength (double l)

virtual boost::property_tree::ptree	ToPtree () const
	Convert the cell attributes to a ptree. More...

Protected Attributes
BoundaryType	m_boundary_type

int	m_cell_type

std::vector< double >	m_chem

bool	m_dead
	For future use, when apoptosis gets set up.

int	m_div_counter
	Keep track of divisions in the cell ancestry.

int	m_div_time

bool	m_fixed

double	m_solute

double	m_stiffness
	Stiffness like in Hogeweg (2000).

double	m_target_area

double	m_target_length

Detailed Description

Attributes of Cell.

Definition at line 36 of file CellAttributes.h.

Member Function Documentation

ptree SimPT_Sim::CellAttributes::ToPtree ( ) const

virtual

Convert the cell attributes to a ptree.

The format of a cell attributes ptree is as follows:

<boundary>[the boundary type]</boundary> <dead>[true if the cell is dead]</dead> <division_count>[the number of divisions of the cell]</division_count> <fixed>[true if the cell is fixed]</fixed> <stiffness>[the stiffness]</stiffness> <target_area>[the target area]</target_area> <target_length>[the target length]</target_length> <type>[the cell type]</type> <chemical_array> (for every chemical this cell has) <chemical>[the value of the chemical]</chemical> </chemical_array>

Reimplemented in SimPT_Sim::Cell.

Definition at line 103 of file CellAttributes.cpp.

References SimPT_Sim::WallType::ToString().

Referenced by SimPT_Sim::Cell::ToPtree().

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The documentation for this class was generated from the following files:

Public Member Functions

Protected Attributes

Detailed Description

Member Function Documentation