VPTissue Reference Manual
cell2cell_transport/Source.h
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1 #ifndef DEFAULT_CELL_TO_CELL_TRANSPORT_SOURCE_H_INCLUDED
2 #define DEFAULT_CELL_TO_CELL_TRANSPORT_SOURCE_H_INCLUDED
3 /*
4  * Copyright 2011-2016 Universiteit Antwerpen
5  *
6  * Licensed under the EUPL, Version 1.1 or as soon they will be approved by
7  * the European Commission - subsequent versions of the EUPL (the "Licence");
8  * You may not use this work except in compliance with the Licence.
9  * You may obtain a copy of the Licence at: http://ec.europa.eu/idabc/eupl5
10  *
11  * Unless required by applicable law or agreed to in writing, software
12  * distributed under the Licence is distributed on an "AS IS" basis,
13  * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
14  * See the Licence for the specific language governing
15  * permissions and limitations under the Licence.
16  */
22 #include "sim/CoreData.h"
23 
24 #include <vector>
25 
26 namespace SimPT_Sim { class Wall; }
27 
28 namespace SimPT_Default {
29 namespace CellToCellTransport {
30 
31 using namespace SimPT_Sim;
32 
36 class Source
37 {
38 public:
40  Source(const CoreData& cd);
41 
43  void Initialize(const CoreData& cd);
44 
46  void operator()(Wall* w, double* dchem_c1, double* dchem_c2);
47 
48 private:
49  CoreData m_cd;
50  unsigned int m_chemical_count;
51  std::vector<double> m_D;
52  double m_ka;
53  double m_tip_source;
54  double m_transport;
55 };
56 
57 } // namespace
58 } // namespace
59 
60 #endif // end_of_include_guard
Core data with mesh, parameters, random engine and time data.
Definition: CoreData.h:38
Core data used during model execution.
Namespace for components of the Default model group.
Namespace for the core simulator.
A cell wall, runs between cell corner points and consists of wall elements.
Definition: Wall.h:48