VPTissue Reference Manual
cell_housekeep/SmithPhyllotaxis.h
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1 #ifndef DEFAULT_CELL_HOUSEKEEP_SMITHPHYLLOTAXIS_H_INCLUDED
2 #define DEFAULT_CELL_HOUSEKEEP_SMITHPHYLLOTAXIS_H_INCLUDED
3 /*
4  * Copyright 2011-2016 Universiteit Antwerpen
5  *
6  * Licensed under the EUPL, Version 1.1 or as soon they will be approved by
7  * the European Commission - subsequent versions of the EUPL (the "Licence");
8  * You may not use this work except in compliance with the Licence.
9  * You may obtain a copy of the Licence at: http://ec.europa.eu/idabc/eupl5
10  *
11  * Unless required by applicable law or agreed to in writing, software
12  * distributed under the Licence is distributed on an "AS IS" basis,
13  * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
14  * See the Licence for the specific language governing
15  * permissions and limitations under the Licence.
16  */
22 #include "sim/CoreData.h"
23 
24 namespace SimPT_Sim {
25 class Cell;
26 }
27 
28 namespace SimPT_Default {
29 namespace CellHousekeep {
30 
31 using namespace SimPT_Sim;
32 
37 public:
39  SmithPhyllotaxis(const CoreData& cd);
40 
42  void Initialize(const CoreData& cd);
43 
45  void operator()(Cell* cell);
46 
47 private:
48  CoreData m_cd;
49  double m_area_incr;
50  double m_cell_expansion_rate;
51  double m_elastic_modulus;
52  double m_response_time;
53  double m_time_step;
54  double m_viscosity_const;
55 };
56 
57 } // namespace
58 } // namespace
59 
60 #endif // end_of_include_guard
61 
Core data with mesh, parameters, random engine and time data.
Definition: CoreData.h:38
A cell contains walls and nodes.
Definition: Cell.h:48
Core data used during model execution.
Implements Smith phyllotaxis cell housekeeping.
Namespace for components of the Default model group.
Namespace for the core simulator.