VPTissue Reference Manual
VPTissue.h
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1 #ifndef DEFAULT_TIME_EVOLVER_VPTISSUE_H_INCLUDED
2 #define DEFAULT_TIME_EVOLVER_VPTISSUE_H_INCLUDED
3 /*
4  * Copyright 2011-2016 Universiteit Antwerpen
5  *
6  * Licensed under the EUPL, Version 1.1 or as soon they will be approved by
7  * the European Commission - subsequent versions of the EUPL (the "Licence");
8  * You may not use this work except in compliance with the Licence.
9  * You may obtain a copy of the Licence at: http://ec.europa.eu/idabc/eupl5
10  *
11  * Unless required by applicable law or agreed to in writing, software
12  * distributed under the Licence is distributed on an "AS IS" basis,
13  * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
14  * See the Licence for the specific language governing
15  * permissions and limitations under the Licence.
16  */
22 #include "sim/CoreData.h"
23 #include "sim/SimPhase.h"
24 #include "sim/SimTimingTraits.h"
25 
26 namespace SimPT_Default {
27 namespace TimeEvolver {
28 
29 using namespace SimPT_Sim;
30 
31 using boost::property_tree::ptree;
32 class Sim;
33 
37 class VPTissue : public SimTimingTraits
38 {
39 public:
41  VPTissue(const CoreData& cd);
42 
44  void Initialize(const CoreData& cd);
45 
47  std::tuple<SimTimingTraits::CumulativeTimings, bool>
48  operator()(double time_slice, SimPhase phase = SimPhase::NONE);
49 
50 private:
51  CoreData m_cd;
52 };
53 
54 } // namespace
55 } // namespace
56 
57 #endif // end-of-include-guard
Core data with mesh, parameters, random engine and time data.
Definition: CoreData.h:38
Core data used during model execution.
Types related to timekeeping.
Definition: ClockTraits.h:36
Simulator: mesh & parameters, model & algorithms.
Definition: Sim.h:50
Namespace for components of the Default model group.
Namespace for the core simulator.
Declaration of Timekeeper.
Composite time step: ReactionAndTransport, then Grow and then Housekeep.
Definition: VPTissue.h:37
SimPhase enum class.